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  • Top cofit genes for GFF3611 from Sphingobium sp. HT1-2

    hypothetical protein
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF437 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) no 0.81
    2 GFF2173 hypothetical protein no 0.80
    3 GFF4229 hypothetical protein no 0.80
    4 GFF2024 Rhamnogalacturonan endolyase (EC 4.2.2.23) no 0.79
    5 GFF5036 Uncharacterized sugar:proton symporter no 0.79
    6 GFF3632 Alkanesulfonates transport system permease protein no 0.79
    7 GFF1780 hypothetical protein no 0.78
    8 GFF4128 Membrane alanine aminopeptidase N (EC 3.4.11.2) no 0.78
    9 GFF2203 SWI/SNF family helicase no 0.77
    10 GFF98 NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) no 0.77
    11 GFF1309 hypothetical protein no 0.77
    12 GFF4915 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) no 0.77
    13 GFF2573 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) no 0.76
    14 GFF5037 Levanase (EC 3.2.1.65) no 0.76
    15 GFF1529 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.76
    16 GFF5087 Zinc-type alcohol dehydrogenase-like protein no 0.76
    17 GFF3130 hypothetical protein no 0.75
    18 GFF3067 hypothetical protein no 0.75
    19 GFF2602 hypothetical protein no 0.75
    20 GFF4248 hypothetical protein no 0.75

    Or look for negative cofitness