Top cofit genes for GFF3606 from Variovorax sp. SCN45

Similarities with probable transcriptional regulator LumQ
SEED: Similarities with probable transcriptional regulator LumQ

Rank Hit Name Description Conserved? Cofitness  
1 GFF4698 Transcriptional regulator of various polyols utilization, AraC family no 0.54
2 GFF1345 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.51
3 GFF7301 Glycogen phosphorylase (EC 2.4.1.1) 0.40 0.51
4 GFF6640 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.51
5 GFF3455 Two component response regulator associated with urea and amide use no 0.51
6 GFF5210 hypothetical protein no 0.50
7 GFF5 FIG00537881: hypothetical protein no 0.50
8 GFF423 Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) no 0.49
9 GFF183 Virulence protein no 0.48
10 GFF2919 no description no 0.48
11 GFF5581 SSU ribosomal protein S5p (S2e) no 0.47
12 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.47
13 GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly no 0.46
14 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 no 0.46
15 GFF2119 Type IV fimbrial biogenesis protein PilW no 0.46
16 GFF6069 Permease of the drug/metabolite transporter (DMT) superfamily no 0.46
17 GFF4981 Cysteine desulfurase (EC 2.8.1.7) no 0.45
18 GFF600 Metal-dependent phosphohydrolase, HD subdomain no 0.45
19 GFF63 Putative glycosyltransferase no 0.45
20 GFF4180 hypothetical protein no 0.45

Or look for negative cofitness