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  • Top cofit genes for GFF3604 from Variovorax sp. SCN45

    Formate-dependent phosphoribosylglycinamide formyltransferase
    SEED: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
    KEGG: phosphoribosylglycinamide formyltransferase 2

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF674 no description no 0.63
    2 GFF3145 Two-component system response regulator QseB no 0.60
    3 GFF1957 no description no 0.58
    4 GFF1971 Creatinine amidohydrolase (EC 3.5.2.10) no 0.57
    5 GFF7172 Manganese transport protein MntH 0.52 0.56
    6 GFF20 hypothetical protein no 0.56
    7 GFF5648 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) no 0.56
    8 GFF5500 hypothetical protein no 0.55
    9 GFF4765 ADP-ribose pyrophosphatase (EC 3.6.1.13) no 0.55
    10 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) 0.87 0.54
    11 GFF1272 no description no 0.54
    12 GFF4843 Conjugative transfer protein TrbF no 0.53
    13 GFF1208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.53
    14 GFF4246 FIG00464377: hypothetical protein no 0.53
    15 GFF3574 hypothetical protein no 0.53
    16 GFF6373 T6SS component TssA (ImpA) no 0.52
    17 GFF629 hypothetical protein no 0.52
    18 GFF6542 Transcriptional regulator, AcrR family no 0.51
    19 GFF4192 no description no 0.51
    20 GFF5619 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.51

    Or look for negative cofitness