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Cofit
Protein
Homologs
Top cofit genes for GFF3603 from
Sphingobium sp. HT1-2
DNA methylase, putative
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2985
Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
no
0.86
2
GFF4128
Membrane alanine aminopeptidase N (EC 3.4.11.2)
no
0.82
3
GFF2024
Rhamnogalacturonan endolyase (EC 4.2.2.23)
no
0.81
4
GFF3033
RNA polymerase, sigma-24 subunit, ECF subfamily
no
0.81
5
GFF409
Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9)
no
0.80
6
GFF3914
Chloride channel protein
no
0.79
7
GFF2735
Uncharacterized MFS-type transporter
no
0.78
8
GFF1033
Tetrapartite efflux system, inner membrane component FusBC-like
no
0.78
9
GFF3123
protein of unknown function DUF344
no
0.77
10
GFF1231
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
no
0.77
11
GFF4084
UPF0126 inner membrane protein CC_3680
no
0.77
12
GFF697
hypothetical protein
no
0.77
13
GFF4552
Glycosyltransferase
no
0.77
14
GFF5094
Type IV secretory pathway, VirD2 components (relaxase)
no
0.76
15
GFF3608
hypothetical protein
no
0.76
16
GFF1754
putative oxidoreductase, nitronate monooxygenase family
no
0.75
17
GFF4669
Mobile element protein
no
0.75
18
GFF591
hypothetical protein
no
0.75
19
GFF1330
Gene Transfer Agent terminase protein
no
0.75
20
GFF3565
hypothetical protein
no
0.75
Or look for
negative cofitness