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  • Top cofit genes for GFF3601 from Variovorax sp. SCN45

    Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily
    SEED: small molecule metabolism; degradation; amines
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2201 hypothetical protein no 0.44
    2 GFF6215 no description no 0.43
    3 GFF1608 Aminotransferase, class III no 0.40
    4 GFF1071 no description no 0.39
    5 GFF139 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) no 0.38
    6 GFF3420 Transcriptional regulator, AcrR family no 0.38
    7 GFF6944 Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9) @ Fructose-6-phosphate phosphoketolase (EC 4.1.2.22) no 0.38
    8 GFF296 Septum formation protein Maf no 0.38
    9 GFF3724 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.37
    10 GFF5759 Flagellar transcriptional activator FlhD no 0.37
    11 GFF6367 T6SS component TssF (ImpG/VasA) no 0.37
    12 GFF4395 Octaprenyl diphosphate synthase (EC 2.5.1.90) no 0.37
    13 GFF4964 Sulfate permease no 0.36
    14 GFF4679 Inositol-1-monophosphatase (EC 3.1.3.25) no 0.36
    15 GFF7228 Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) no 0.35
    16 GFF1889 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate no 0.35
    17 GFF6978 no description 0.46 0.35
    18 GFF5245 FIG00771430: hypothetical protein no 0.35
    19 GFF5793 Low-affinity inorganic phosphate transporter no 0.35
    20 GFF2468 Outer membrane protein assembly factor YaeT no 0.35

    Or look for negative cofitness