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  • Top cofit genes for GFF3596 from Variovorax sp. SCN45

    TRAP-type C4-dicarboxylate transport system, large permease component
    SEED: TRAP-type C4-dicarboxylate transport system, large permease component

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2410 Intracellular protease no 0.59
    2 GFF6969 hypothetical protein no 0.57
    3 GFF6220 hypothetical protein no 0.55
    4 GFF3676 Outer membrane protein romA no 0.55
    5 GFF4221 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) no 0.54
    6 GFF1198 no description no 0.53
    7 GFF1471 Uncharacterized MFS-type transporter no 0.52
    8 GFF3686 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) no 0.51
    9 GFF4469 Cell division protein FtsA no 0.50
    10 GFF3298 Multimeric flavodoxin WrbA no 0.49
    11 GFF5471 Creatinine amidohydrolase (EC 3.5.2.10) no 0.49
    12 GFF4030 Transcriptional regulator, MerR family no 0.49
    13 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.48
    14 GFF1930 RTX toxin transporter, ATP-binding protein no 0.48
    15 GFF6328 LPS-assembly lipoprotein LptE no 0.47
    16 GFF1182 FIG00347825: hypothetical protein no 0.47
    17 GFF1489 Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like no 0.47
    18 GFF344 no description no 0.47
    19 GFF4651 Kynurenine 3-monooxygenase (EC 1.14.13.9) no 0.47
    20 GFF2413 hypothetical protein no 0.47

    Or look for negative cofitness