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Cofit
Protein
Homologs
Top cofit genes for GFF3596 from
Hydrogenophaga sp. GW460-11-11-14-LB1
Sensory box histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5394
FIG01210906: hypothetical protein
no
0.38
2
GFF1394
ABC transporter, fused ATPase and inner membrane subunits (EC 3.6.3.27)
no
0.35
3
GFF1581
hypothetical protein
no
0.34
4
GFF4521
ATP-dependent Clp protease ATP-binding subunit ClpA
no
0.34
5
GFF3424
Protein sirB1
no
0.33
6
GFF2591
VfmD protein
no
0.33
7
GFF3611
putative exported protein
no
0.32
8
GFF5582
Zinc transporter, ZIP family
no
0.32
9
GFF2961
putative exported protein
no
0.32
10
GFF4591
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
no
0.31
11
GFF3972
Protein of unknown function DUF81
no
0.31
12
GFF1699
Excinuclease ABC subunit A, dimeric form
no
0.31
13
GFF694
hypothetical protein
no
0.30
14
GFF5730
Probable low-affinity inorganic phosphate transporter
no
0.30
15
GFF4850
Cystathionine beta-lyase (EC 4.4.1.8)
no
0.30
16
GFF1389
General secretion pathway protein N
no
0.30
17
GFF4568
Phytanoyl-CoA dioxygenase
no
0.30
18
GFF1408
Flagellar P-ring protein FlgI
no
0.30
19
GFF4254
probable membrane protein NMA1176
no
0.29
20
GFF2710
Transcriptional regulator, LysR family
no
0.29
Or look for
negative cofitness