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  • Top cofit genes for PS417_18400 from Pseudomonas simiae WCS417

    D-ribose ABC transporter, ATPase component RbsA (from data)
    Original annotation: sugar ABC transporter ATPase
    SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
    KEGG: ribose transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_18390 LacI family transcriptional regulator 0.65 0.57
    2 PS417_18395 D-ribose ABC transporter, permease component RbsC (from data) 0.95 0.53
    3 PS417_22385 quinolinate synthase A 0.72 0.35
    4 PS417_03925 nicotinate-nucleotide pyrophosphorylase no 0.31
    5 PS417_15695 molybdenum cofactor biosynthesis protein A no 0.31
    6 PS417_02985 diguanylate cyclase no 0.30
    7 PS417_16465 sirohydrochlorin ferrochelatase no 0.27
    8 PS417_04005 ornithine decarboxylase 0.21 0.25
    9 PS417_08380 ABC transporter ATP-binding protein no 0.25
    10 PS417_22690 phosphogluconate dehydratase 0.33 0.25
    11 PS417_25970 diguanylate cyclase 0.18 0.24
    12 PS417_20125 phosphoribosylglycinamide formyltransferase 0.73 0.24
    13 PS417_15715 nitrate reductase no 0.24
    14 PS417_15710 nitrate reductase no 0.23
    15 PS417_19165 insecticidal toxin complex protein no 0.22
    16 PS417_04675 deoxyribonuclease no 0.22
    17 PS417_19150 ABC transporter ATP-binding protein no 0.22
    18 PS417_18440 hypothetical protein no 0.22
    19 PS417_28250 cell wall assembly protein 0.17 0.21
    20 PS417_07115 L-aspartate oxidase no 0.21

    Or look for negative cofitness