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  • Top cofit genes for PS417_18395 from Pseudomonas simiae WCS417

    D-ribose ABC transporter, permease component RbsC (from data)
    Original annotation: ABC transporter permease
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: ribose transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_18400 D-ribose ABC transporter, ATPase component RbsA (from data) 0.95 0.53
    2 PS417_18390 LacI family transcriptional regulator 0.84 0.32
    3 PS417_22690 phosphogluconate dehydratase 0.35 0.23
    4 PS417_03925 nicotinate-nucleotide pyrophosphorylase no 0.23
    5 PS417_24745 gamma-glutamyl phosphate reductase no 0.23
    6 PS417_02985 diguanylate cyclase 0.28 0.22
    7 PS417_22385 quinolinate synthase A 0.22 0.21
    8 PS417_27040 3-phosphoglycerate dehydrogenase 0.26 0.21
    9 PS417_23805 acetolactate synthase 3 regulatory subunit no 0.21
    10 PS417_15260 protein phosphatase no 0.21
    11 PS417_19420 OHCU decarboxylase 0.58 0.21
    12 PS417_23810 acetolactate synthase 3 catalytic subunit 0.35 0.21
    13 PS417_02415 phosphoserine phosphatase no 0.20
    14 PS417_16465 sirohydrochlorin ferrochelatase no 0.20
    15 PS417_09725 transporter 0.25 0.20
    16 PS417_06655 class V aminotransferase no 0.19
    17 PS417_15255 serine/threonine protein kinase no 0.19
    18 PS417_01855 phosphoribosyl-AMP cyclohydrolase 0.35 0.19
    19 PS417_18585 3-isopropylmalate dehydrogenase 0.31 0.19
    20 PS417_00485 ABC transporter permease no 0.19

    Or look for negative cofitness