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  • Top cofit genes for PS417_18390 from Pseudomonas simiae WCS417

    LacI family transcriptional regulator
    SEED: Ribose operon repressor
    KEGG: LacI family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_18400 D-ribose ABC transporter, ATPase component RbsA (from data) 0.65 0.57
    2 PS417_22125 porin no 0.42
    3 PS417_08345 chemotaxis protein no 0.39
    4 PS417_24290 hypothetical protein 0.43 0.37
    5 PS417_00305 cytochrome oxidase subunit I 0.80 0.36
    6 PS417_14915 host specificity protein 0.47 0.35
    7 PS417_02975 3-dehydroquinate dehydratase 0.47 0.33
    8 PS417_00335 cytochrome B561 0.81 0.33
    9 PS417_00300 cytochrome B559 subunit alpha 0.81 0.32
    10 PS417_18395 D-ribose ABC transporter, permease component RbsC (from data) 0.84 0.32
    11 PS417_01275 LysR family transcriptional regulator 0.32 0.31
    12 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase 0.40 0.31
    13 PS417_16005 ATPase 0.85 0.31
    14 PS417_24295 carbon starvation protein A 0.61 0.30
    15 PS417_03310 carbonate dehydratase no 0.30
    16 PS417_14920 CoA-transferase 0.77 0.30
    17 PS417_16500 arginyl-tRNA-protein transferase 0.47 0.29
    18 PS417_25835 hypothetical protein 0.54 0.29
    19 PS417_26250 peptidase M19 no 0.29
    20 PS417_04195 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) 0.79 0.29

    Or look for negative cofitness