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  • Top cofit genes for PS417_18355 from Pseudomonas simiae WCS417

    DNA-binding protein
    SEED: Cold shock protein CspG
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19055 ArsR family transcriptional regulator no 0.48
    2 PS417_22390 lactate dehydrogenase no 0.47
    3 PS417_18350 hypothetical protein 0.61 0.46
    4 PS417_22405 7-carboxy-7-deazaguanine synthase 0.17 0.44
    5 PS417_23155 pilus assembly protein PilW no 0.43
    6 PS417_21105 aminodeoxychorismate synthase no 0.40
    7 PS417_26775 thiazole synthase 0.31 0.39
    8 PS417_27610 hypothetical protein 0.33 0.39
    9 PS417_06370 cold-shock protein 0.35 0.39
    10 PS417_10645 magnesium ABC transporter ATPase no 0.38
    11 PS417_15075 NAD-glutamate dehydrogenase no 0.38
    12 PS417_04495 LITAF-like zinc ribbon domain containing protein no 0.38
    13 PS417_18365 hypothetical protein 0.41 0.37
    14 PS417_25635 biotin--protein ligase no 0.36
    15 PS417_03990 ligand-gated channel protein no 0.36
    16 PS417_11900 conjugal transfer protein TraR no 0.36
    17 PS417_09600 glycosyl transferase family 1 no 0.35
    18 PS417_11940 TonB-dependent receptor no 0.35
    19 PS417_22400 7-cyano-7-deazaguanine synthase no 0.35
    20 PS417_09590 membrane protein no 0.33

    Or look for negative cofitness