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    • Top cofit genes for GFF3582 from Variovorax sp. SCN45

    Tripartite tricarboxylate transporter TctC family
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2682 Protein containing domains DUF403 no 0.76
    2 GFF6635 FIG00441227: hypothetical protein no 0.74
    3 GFF2683 Protein containing domains DUF404, DUF407 no 0.70
    4 GFF7374 FIG00984748: hypothetical protein no 0.69
    5 GFF3386 hypothetical protein no 0.69
    6 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.69
    7 GFF5409 FIG00576366: hypothetical protein no 0.69
    8 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) no 0.69
    9 GFF6020 UPF0246 protein YaaA no 0.68
    10 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.67
    11 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.67
    12 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.67
    13 GFF3730 Integral membrane protein no 0.67
    14 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.66
    15 GFF4397 hypothetical protein no 0.66
    16 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.66
    17 GFF7375 Arginine:pyruvate transaminase no 0.66
    18 GFF4909 Two-component transcriptional response regulator, OmpR family no 0.65
    19 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.65
    20 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.65

    Or look for negative cofitness