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  • Top cofit genes for GFF3581 from Variovorax sp. SCN45

    Transcriptional regulator, ArsR family
    SEED: Transcriptional regulator, ArsR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4570 Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) no 0.62
    2 GFF3144 hypothetical protein no 0.60
    3 GFF3148 no description no 0.60
    4 GFF1968 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.59
    5 GFF6365 T6SS AAA+ chaperone ClpV (TssH) no 0.58
    6 GFF3255 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) 0.23 0.56
    7 GFF3936 no description no 0.54
    8 GFF443 Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family no 0.54
    9 GFF5831 Ketosteroid isomerase-related protein no 0.54
    10 GFF2571 Glutaredoxin 3 (Grx3) 0.51 0.53
    11 GFF608 VgrG protein no 0.53
    12 GFF6615 putative plasmid stabilization protein no 0.52
    13 GFF4023 no description no 0.51
    14 GFF2147 no description no 0.50
    15 GFF7212 Nitrilotriacetate monooxygenase [FMNH2] no 0.50
    16 GFF2002 Thioredoxin related protein PA2694 no 0.49
    17 GFF4550 NAD(FAD)-utilizing dehydrogenase, sll0175 homolog 0.22 0.49
    18 GFF626 CzcABC family efflux RND transporter, transmembrane protein no 0.49
    19 GFF4336 BUG/TctC family periplasmic protein no 0.49
    20 GFF7209 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.49

    Or look for negative cofitness