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  • Top cofit genes for GFF3579 from Hydrogenophaga sp. GW460-11-11-14-LB1

    DNA helicase II related protein
    SEED: DNA helicase II related protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4131 Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) no 0.73
    2 GFF5737 LSU ribosomal protein L19p no 0.70
    3 GFF1223 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) no 0.70
    4 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) no 0.69
    5 GFF2562 hypothetical protein no 0.67
    6 GFF3348 DNA recombination and repair protein RecO no 0.67
    7 GFF5561 Topoisomerase IV subunit B (EC 5.99.1.-) no 0.67
    8 GFF4243 ATP-dependent DNA helicase pcrA (EC 3.6.1.-) no 0.66
    9 GFF708 Nucleoside-diphosphate-sugar epimerases no 0.66
    10 GFF770 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.64
    11 GFF800 Predicted D-glucarate or D-galactorate regulator, GntR family no 0.64
    12 GFF5110 Phytoene synthase (EC 2.5.1.32) no 0.63
    13 GFF2560 hypothetical protein no 0.63
    14 GFF4681 Transcriptional regulator, IclR family no 0.62
    15 GFF4962 Excinuclease ABC subunit B 0.56 0.62
    16 GFF3817 hypothetical protein no 0.62
    17 GFF1461 Flagellar biosynthesis protein FliP no 0.62
    18 GFF249 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) no 0.61
    19 GFF1836 FIG00933651: hypothetical protein no 0.61
    20 GFF5559 Topoisomerase IV subunit A (EC 5.99.1.-) no 0.61

    Or look for negative cofitness