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  • Top cofit genes for PS417_18285 from Pseudomonas simiae WCS417

    multidrug transporter
    SEED: RND efflux system, inner membrane transporter CmeB
    KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02815 urea ABC transporter ATP-binding protein 0.39 0.25
    2 PS417_07000 hypothetical protein no 0.24
    3 PS417_03025 penicillin-binding protein 1C no 0.22
    4 PS417_16960 fimbrial protein no 0.22
    5 PS417_08325 acyl-CoA thioesterase 0.35 0.21
    6 PS417_26325 ABC transporter ATP-binding protein 0.43 0.20
    7 PS417_05250 hypothetical protein no 0.20
    8 PS417_23950 polynucleotide phosphorylase/polyadenylase 0.13 0.20
    9 PS417_23335 isoleucyl-tRNA synthetase no 0.20
    10 PS417_10360 MFS transporter no 0.20
    11 PS417_07160 glycine cleavage system protein R no 0.20
    12 PS417_22270 hypothetical protein no 0.20
    13 PS417_10220 hypothetical protein no 0.19
    14 PS417_15010 TetR family transcriptional regulator no 0.19
    15 PS417_26460 NAD-dependent DNA ligase LigB 0.27 0.19
    16 PS417_26555 endoribonuclease L-PSP no 0.19
    17 PS417_22800 heme iron utilization protein no 0.19
    18 PS417_13670 protease no 0.19
    19 PS417_09900 hypothetical protein no 0.19
    20 PS417_00975 hypothetical protein no 0.18

    Or look for negative cofitness