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  • Top cofit genes for GFF3570 from Variovorax sp. SCN45

    Organic hydroperoxide resistance transcriptional regulator
    SEED: Organic hydroperoxide resistance transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1478 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.41 0.63
    2 GFF1567 Demethylmenaquinone methyltransferase-like protein no 0.56
    3 GFF668 Transcriptional regulator, LysR family 0.40 0.56
    4 GFF6371 T6SS component TssC (ImpC/VipB) no 0.56
    5 GFF2267 Integral membrane protein no 0.55
    6 GFF4488 Metal-binding GTPase YjiA 0.22 0.55
    7 GFF5024 hypothetical protein no 0.55
    8 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system 0.84 0.54
    9 GFF491 no description no 0.54
    10 GFF2077 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.53
    11 GFF6264 Ribose 1,5-bisphosphate phosphokinase PhnN (EC 2.7.4.23) no 0.52
    12 GFF7383 Esterase/lipase no 0.52
    13 GFF5274 Various polyols ABC transporter, permease protein 2 no 0.52
    14 GFF2049 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) no 0.51
    15 GFF2728 hypothetical protein no 0.50
    16 GFF1737 Carbon starvation protein A 0.32 0.50
    17 GFF3228 hypothetical protein no 0.50
    18 GFF2740 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) no 0.50
    19 GFF6051 Enoyl-CoA hydratase (EC 4.2.1.17) 0.20 0.50
    20 GFF278 O-methyltransferase Rv0190 no 0.49

    Or look for negative cofitness