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Cofit
Protein
Homologs
Top cofit genes for GFF3565 from
Variovorax sp. SCN45
Acyl-CoA dehydrogenase
SEED: Acyl-CoA dehydrogenase (EC 1.3.8.7)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5825
Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1)
no
0.64
2
GFF3541
hypothetical protein
no
0.64
3
GFF2907
Glucarate dehydratase (EC 4.2.1.40)
no
0.56
4
GFF2797
Molybdopterin synthase sulfur carrier subunit
0.18
0.56
5
GFF3542
hypothetical protein
no
0.55
6
GFF1864
Transcriptional regulator, LysR family
no
0.54
7
GFF129
Ankyrin
no
0.54
8
GFF4228
2-hydroxychromene-2-carboxylate isomerase
no
0.54
9
GFF5220
putative secreted oxidoreductase
no
0.54
10
GFF1323
Methionine aminopeptidase (EC 3.4.11.18)
no
0.54
11
GFF7011
Taurine ABC transporter, permease protein TauC
no
0.53
12
GFF1240
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.53
13
GFF3676
Outer membrane protein romA
no
0.53
14
GFF789
protease Do
no
0.52
15
GFF4641
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.52
16
GFF3787
Biotin carboxylase (EC 6.3.4.14)
no
0.52
17
GFF6652
Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4)
no
0.51
18
GFF1063
dioxygenase, TauD/TfdA family
no
0.51
19
GFF3212
Oxidoreductase
no
0.51
20
GFF3795
Flagellar hook-length control protein FliK
no
0.51
Or look for
negative cofitness