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  • Top cofit genes for GFF3565 from Variovorax sp. SCN45

    Acyl-CoA dehydrogenase
    SEED: Acyl-CoA dehydrogenase (EC 1.3.8.7)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5825 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.64
    2 GFF3541 hypothetical protein no 0.64
    3 GFF2907 Glucarate dehydratase (EC 4.2.1.40) no 0.56
    4 GFF2797 Molybdopterin synthase sulfur carrier subunit 0.18 0.56
    5 GFF3542 hypothetical protein no 0.55
    6 GFF1864 Transcriptional regulator, LysR family no 0.54
    7 GFF129 Ankyrin no 0.54
    8 GFF4228 2-hydroxychromene-2-carboxylate isomerase no 0.54
    9 GFF5220 putative secreted oxidoreductase no 0.54
    10 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) no 0.54
    11 GFF7011 Taurine ABC transporter, permease protein TauC no 0.53
    12 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.53
    13 GFF3676 Outer membrane protein romA no 0.53
    14 GFF789 protease Do no 0.52
    15 GFF4641 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.52
    16 GFF3787 Biotin carboxylase (EC 6.3.4.14) no 0.52
    17 GFF6652 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.51
    18 GFF1063 dioxygenase, TauD/TfdA family no 0.51
    19 GFF3212 Oxidoreductase no 0.51
    20 GFF3795 Flagellar hook-length control protein FliK no 0.51

    Or look for negative cofitness