• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF3563 from Variovorax sp. SCN45

    L-carnitine dehydratase/bile acid-inducible protein F
    SEED: L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1646 Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching no 0.59
    2 GFF2612 no description no 0.52
    3 GFF3934 PhnB protein no 0.51
    4 GFF3396 Benzoate ABC transporter, permease protein 1 no 0.51
    5 GFF654 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) 0.46 0.49
    6 GFF3057 Aspartate aminotransferase (EC 2.6.1.1) no 0.49
    7 GFF4233 no description no 0.49
    8 GFF5354 C4-dicarboxylate transport protein no 0.49
    9 GFF2949 no description no 0.48
    10 GFF3291 no description no 0.48
    11 GFF4414 Conjugative transfer protein TrbB no 0.47
    12 GFF3843 Uncharacterized MFS-type transporter 0.19 0.47
    13 GFF4574 BUG/TctC family periplasmic protein no 0.46
    14 GFF1216 Isoaspartyl aminopeptidase (EC 3.4.19.5) @ Asp-X dipeptidase no 0.46
    15 GFF4081 Multicopper oxidase no 0.45
    16 GFF6391 RfbJ protein no 0.45
    17 GFF4417 Conjugative transfer protein TrbE no 0.44
    18 GFF1734 no description no 0.44
    19 GFF3151 no description no 0.44
    20 GFF6442 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.44

    Or look for negative cofitness