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  • Top cofit genes for GFF3561 from Variovorax sp. SCN45

    Glycosyltransferases involved in cell wall biogenesis
    SEED: Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4706 Na(+) dependent transporter,Sodium Bile acid symporter family no 0.57
    2 GFF2064 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) 0.58 0.57
    3 GFF3904 Probable signal peptide protein no 0.57
    4 GFF3291 no description no 0.56
    5 GFF4232 no description no 0.54
    6 GFF6650 no description no 0.54
    7 GFF5639 Death on curing protein, Doc toxin no 0.54
    8 GFF6852 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.53
    9 GFF2361 hypothetical protein no 0.53
    10 GFF5916 T6SS component TssA (ImpA) no 0.52
    11 GFF4314 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) no 0.52
    12 GFF4781 AttH component of AttEFGH ABC transport system no 0.51
    13 GFF3804 BUG/TctC family periplasmic protein no 0.51
    14 GFF3913 Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain no 0.50
    15 GFF2863 no description no 0.49
    16 GFF6682 Efflux ABC transporter, permease protein no 0.49
    17 GFF2562 UPF0391 membrane protein RGE_28580 no 0.48
    18 GFF4417 Conjugative transfer protein TrbE no 0.47
    19 GFF2874 Deacetylases, including yeast histone deacetylase and acetoin utilization protein no 0.47
    20 GFF6556 hypothetical protein no 0.47

    Or look for negative cofitness