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  • Top cofit genes for GFF3556 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4564 hypothetical protein no 0.58
    2 GFF3450 Transcriptional regulator, LacI family no 0.58
    3 GFF6839 hypothetical protein no 0.55
    4 GFF5814 Rhodanese-related sulfurtransferase no 0.53
    5 GFF2920 TRAP-type C4-dicarboxylate transport system, large permease component no 0.53
    6 GFF7139 MATE efflux family protein no 0.53
    7 GFF4776 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.52
    8 GFF5310 Cytochrome c4 no 0.51
    9 GFF864 no description no 0.51
    10 GFF5983 Transcriptional regulator, LysR family no 0.51
    11 GFF6684 ABC transporter, ATP-binding protein no 0.50
    12 GFF5976 Transcriptional regulator, AraC family no 0.50
    13 GFF3468 Nucleoside-diphosphate-sugar epimerases no 0.49
    14 GFF6403 Stresses-induced protein Ves (HutD) no 0.49
    15 GFF7134 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.49
    16 GFF4482 Transcriptional regulator MraZ no 0.49
    17 GFF2237 Intracellular protease no 0.48
    18 GFF933 YgfD: protein that forms a complex with the methylmalonyl-CoA mutase in a pathway for conversion of succinyl-CoA to propionyl-CoA no 0.48
    19 GFF4246 FIG00464377: hypothetical protein no 0.48
    20 GFF3027 T6SS component TssK (ImpJ/VasE) no 0.47

    Or look for negative cofitness