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  • Top cofit genes for GFF3555 from Variovorax sp. SCN45

    Mg-chelatase subunit ChlD
    SEED: Mg-chelatase subunit ChlD

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5789 YciO protein, TsaC/YrdC paralog no 0.58
    2 GFF2318 Transcriptional regulator ArgP, LysR family 0.38 0.54
    3 GFF3672 no description no 0.52
    4 GFF5429 Iron(III) dicitrate transport protein FecA no 0.52
    5 GFF4427 hypothetical protein no 0.52
    6 GFF2204 no description no 0.51
    7 GFF5262 Ferric iron ABC transporter, iron-binding protein no 0.50
    8 GFF7150 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) no 0.50
    9 GFF4426 Homolog of eukaryotic DNA ligase III no 0.50
    10 GFF6754 no description no 0.50
    11 GFF7325 Glucans biosynthesis glucosyltransferase H no 0.49
    12 GFF6810 no description no 0.49
    13 GFF5069 BUG/TctC family periplasmic protein no 0.49
    14 GFF6450 Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7) no 0.49
    15 GFF4407 Alkan-1-ol dehydrogenase, PQQ-dependent (EC 1.1.99.20) 0.25 0.49
    16 GFF4993 putative tetratricopeptide repeat family protein no 0.47
    17 GFF841 zinc finger, SWIM-type no 0.47
    18 GFF4211 Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18) no 0.47
    19 GFF3000 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.47
    20 GFF7057 Uncharacterized protein conserved in bacteria no 0.47

    Or look for negative cofitness