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  • Top cofit genes for GFF3542 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3565 Acyl-CoA dehydrogenase no 0.55
    2 GFF1518 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.53
    3 GFF7198 Predicted metal-dependent hydrolase of the TIM-barrel fold no 0.52
    4 GFF334 Transcriptional regulator, AraC family no 0.50
    5 GFF3023 C4-dicarboxylate transport protein no 0.50
    6 GFF4861 Butyryl-CoA dehydrogenase (EC 1.3.8.1) no 0.48
    7 GFF1555 Transcriptional regulator, LysR family no 0.47
    8 GFF2646 Acetyl-CoA acetyltransferase no 0.47
    9 GFF6713 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.47
    10 GFF3471 hypothetical protein no 0.47
    11 GFF5825 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.46
    12 GFF1635 Polyketide synthase modules and related proteins no 0.45
    13 GFF4548 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.45
    14 GFF685 Tricarboxylate transport protein TctC no 0.45
    15 GFF578 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) no 0.44
    16 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) no 0.44
    17 GFF6045 FIG00932121: hypothetical protein no 0.43
    18 GFF6463 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.43
    19 GFF5232 5'-nucleotidase (EC 3.1.3.5) no 0.43
    20 GFF7020 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.43

    Or look for negative cofitness