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  • Top cofit genes for GFF3541 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6834 no description no 0.64
    2 GFF3565 Acyl-CoA dehydrogenase no 0.64
    3 GFF7342 Oxidoreductase no 0.60
    4 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.58
    5 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) no 0.58
    6 GFF4458 hypothetical protein no 0.58
    7 GFF2907 Glucarate dehydratase (EC 4.2.1.40) no 0.58
    8 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.57
    9 GFF842 hypothetical protein no 0.57
    10 GFF5528 Conjugative transfer protein TrbL no 0.55
    11 GFF203 hypothetical protein no 0.55
    12 GFF3874 Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7) no 0.55
    13 GFF4641 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.55
    14 GFF3676 Outer membrane protein romA no 0.54
    15 GFF814 BUG/TctC family periplasmic protein no 0.54
    16 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) no 0.53
    17 GFF1230 Malic enzyme no 0.52
    18 GFF1542 Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX (EC 3.1.3.3) no 0.52
    19 GFF4899 Transcriptional regulator, Crp/Fnr family no 0.52
    20 GFF2685 DNA internalization-related competence protein ComEC/Rec2 no 0.51

    Or look for negative cofitness