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Cofit
Protein
Homologs
Top cofit genes for GFF3541 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6834
no description
no
0.64
2
GFF3565
Acyl-CoA dehydrogenase
no
0.64
3
GFF7342
Oxidoreductase
no
0.60
4
GFF6798
ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
no
0.58
5
GFF3562
UDP-glucose 6-dehydrogenase (EC 1.1.1.22)
no
0.58
6
GFF4458
hypothetical protein
no
0.58
7
GFF2907
Glucarate dehydratase (EC 4.2.1.40)
no
0.58
8
GFF1240
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.57
9
GFF842
hypothetical protein
no
0.57
10
GFF5528
Conjugative transfer protein TrbL
no
0.55
11
GFF203
hypothetical protein
no
0.55
12
GFF3874
Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7)
no
0.55
13
GFF4641
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.55
14
GFF3676
Outer membrane protein romA
no
0.54
15
GFF814
BUG/TctC family periplasmic protein
no
0.54
16
GFF1323
Methionine aminopeptidase (EC 3.4.11.18)
no
0.53
17
GFF1230
Malic enzyme
no
0.52
18
GFF1542
Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX (EC 3.1.3.3)
no
0.52
19
GFF4899
Transcriptional regulator, Crp/Fnr family
no
0.52
20
GFF2685
DNA internalization-related competence protein ComEC/Rec2
no
0.51
Or look for
negative cofitness