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  • Top cofit genes for GFF3538 from Variovorax sp. SCN45

    Ferric iron ABC transporter, iron-binding protein
    SEED: Ferric iron ABC transporter, iron-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1592 Response regulator/GGDEF/EAL domain protein no 0.54
    2 GFF6495 rifampin ADP-ribosyl transferase no 0.47
    3 GFF5839 no description no 0.45
    4 GFF2796 Dihydrodipicolinate synthase family protein PP2639 no 0.45
    5 GFF4128 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.45
    6 GFF3579 probable iron-sulfur binding protein YPO1417 no 0.44
    7 GFF1273 no description no 0.44
    8 GFF7037 Uncharacterized MFS-type transporter no 0.44
    9 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.44
    10 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no 0.44
    11 GFF374 Transcription elongation factor GreA no 0.44
    12 GFF2722 Transcriptional regulator, LysR family no 0.43
    13 GFF4203 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.43
    14 GFF4779 Broad-specificity amino acid ABC transporter, permease protein 2 no 0.43
    15 GFF6861 no description no 0.43
    16 GFF2136 Ribokinase (EC 2.7.1.15) no 0.43
    17 GFF2711 hypothetical protein no 0.43
    18 GFF1086 putative Glutathione-regulated potassium-efflux system protein KefB no 0.42
    19 GFF7416 DNA/RNA non-specific endonuclease no 0.42
    20 GFF7191 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.42

    Or look for negative cofitness