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  • Top cofit genes for GFF3534 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4635 Transketolase, N-terminal section (EC 2.2.1.1) no 0.61
    2 GFF4634 Transketolase, C-terminal section (EC 2.2.1.1) no 0.60
    3 GFF4611 Predicted transcriptional regulator for fatty acid degradation FadP, TetR family no 0.59
    4 GFF7376 Transcriptional regulator, LysR family no 0.58
    5 GFF2747 17 kDa surface antigen no 0.58
    6 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) no 0.57
    7 GFF3374 no description no 0.57
    8 GFF1992 Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) no 0.57
    9 GFF4639 Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33) no 0.57
    10 GFF5681 Predicted gluconate TRAP family transporter, DctM subunit no 0.56
    11 GFF5411 CAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily no 0.56
    12 GFF7309 Transcriptional regulator, LysR family no 0.56
    13 GFF2543 Uncharacterized membrane protein Bcep18194_A6058 no 0.56
    14 GFF3395 Benzoate ABC transporter, permease protein 2 no 0.56
    15 GFF658 2-dehydropantoate 2-reductase (EC 1.1.1.169) no 0.55
    16 GFF2482 Urease accessory protein UreE no 0.55
    17 GFF271 2-methylcitrate synthase (EC 2.3.3.5) no 0.54
    18 GFF2517 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase 0.26 0.54
    19 GFF4637 CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase (EC 4.2.1.-) no 0.54
    20 GFF5897 hypothetical protein no 0.53

    Or look for negative cofitness