• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF3530 from Variovorax sp. SCN45

    Pseudouridine synthase
    SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase F

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2839 Protein GlcG no 0.58
    2 GFF2656 Acyltransferase 3 no 0.53
    3 GFF1935 GNAT family acetyltransferase PA5433 no 0.51
    4 GFF606 BUG/TctC family periplasmic protein no 0.50
    5 GFF3219 hypothetical protein no 0.50
    6 GFF4429 Inner membrane protein YpjD no 0.49
    7 GFF6155 Aerobic carbon monoxide dehydrogenase (quinone), large chain (EC 1.2.5.3) no 0.48
    8 GFF5328 FIG00537720: hypothetical protein no 0.47
    9 GFF6009 Acyl-CoA dehydrogenase STM0857 no 0.47
    10 GFF6338 no description no 0.47
    11 GFF3328 NADH:flavin oxidoreductases, Old Yellow Enzyme family no 0.46
    12 GFF3695 hypothetical protein no 0.46
    13 GFF1194 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) no 0.45
    14 GFF6313 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.45
    15 GFF6486 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) no 0.45
    16 GFF844 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.44
    17 GFF1102 Uncharacterized oxidoreductase YdgJ 0.29 0.44
    18 GFF466 hypothetical protein no 0.44
    19 GFF5590 no description no 0.44
    20 GFF2276 Chlorogenate esterase no 0.44

    Or look for negative cofitness