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  • Top cofit genes for GFF3525 from Variovorax sp. SCN45

    Protein tyrosine/serine phosphatase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2367 Transcriptional regulator, LysR family no 0.72
    2 GFF2108 hypothetical protein no 0.67
    3 GFF4288 Acyl-CoA dehydrogenase no 0.67
    4 GFF1451 FIG00456379: hypothetical protein no 0.66
    5 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system 0.40 0.66
    6 GFF3496 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.65
    7 GFF5367 GTP cyclohydrolase 1 type 2 homolog YbgI no 0.65
    8 GFF1135 hypothetical protein no 0.64
    9 GFF1737 Carbon starvation protein A no 0.64
    10 GFF128 hypothetical protein no 0.64
    11 GFF4277 Small subunit naph/bph dioxygenase no 0.63
    12 GFF4280 oxidoreductase FAD/NAD(P)-binding domain protein no 0.63
    13 GFF1683 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.63
    14 GFF4228 2-hydroxychromene-2-carboxylate isomerase no 0.61
    15 GFF3378 hypothetical protein no 0.61
    16 GFF1829 4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23) no 0.61
    17 GFF4551 Putative preQ0 transporter YhhQ no 0.61
    18 GFF1755 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.61
    19 GFF7043 Putative transmembrane protein no 0.61
    20 GFF2117 KEGG: type IV fimbrial biogenesis protein FimT no 0.61

    Or look for negative cofitness