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Cofit
Protein
Homologs
Top cofit genes for GFF3525 from
Variovorax sp. SCN45
Protein tyrosine/serine phosphatase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2367
Transcriptional regulator, LysR family
no
0.72
2
GFF2108
hypothetical protein
no
0.67
3
GFF4288
Acyl-CoA dehydrogenase
no
0.67
4
GFF1451
FIG00456379: hypothetical protein
no
0.66
5
GFF3508
Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system
0.40
0.66
6
GFF3496
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.65
7
GFF5367
GTP cyclohydrolase 1 type 2 homolog YbgI
no
0.65
8
GFF1135
hypothetical protein
no
0.64
9
GFF1737
Carbon starvation protein A
no
0.64
10
GFF128
hypothetical protein
no
0.64
11
GFF4277
Small subunit naph/bph dioxygenase
no
0.63
12
GFF4280
oxidoreductase FAD/NAD(P)-binding domain protein
no
0.63
13
GFF1683
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
no
0.63
14
GFF4228
2-hydroxychromene-2-carboxylate isomerase
no
0.61
15
GFF3378
hypothetical protein
no
0.61
16
GFF1829
4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23)
no
0.61
17
GFF4551
Putative preQ0 transporter YhhQ
no
0.61
18
GFF1755
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.61
19
GFF7043
Putative transmembrane protein
no
0.61
20
GFF2117
KEGG: type IV fimbrial biogenesis protein FimT
no
0.61
Or look for
negative cofitness