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  • Top cofit genes for GFF352 from Sphingobium sp. HT1-2

    Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)
    SEED: Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)
    KEGG: 3-oxoacid CoA-transferase subunit B

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3518 General secretion pathway protein E no 0.90
    2 GFF4977 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.79) 0.22 0.80
    3 GFF696 hypothetical protein no 0.78
    4 GFF3621 hypothetical protein no 0.78
    5 GFF149 hypothetical protein no 0.77
    6 GFF2627 FIG040666: hypothetical protein perhaps implicated in de Novo purine biosynthesis no 0.77
    7 GFF4298 IncF plasmid conjugative transfer protein TraG no 0.76
    8 GFF3074 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) no 0.76
    9 GFF1413 Magnesium and cobalt transport protein CorA no 0.76
    10 GFF3482 hypothetical protein 0.41 0.75
    11 GFF4086 TonB-dependent receptor no 0.74
    12 GFF127 Transcriptional regulator, Xre family no 0.73
    13 GFF4354 hypothetical protein no 0.72
    14 GFF5107 hypothetical protein no 0.72
    15 GFF2507 hypothetical protein no 0.72
    16 GFF2735 Uncharacterized MFS-type transporter no 0.71
    17 GFF764 hypothetical protein no 0.71
    18 GFF4593 hypothetical protein no 0.71
    19 GFF1663 Uncharacterized MFS-type transporter 0.52 0.71
    20 GFF3914 Chloride channel protein no 0.71

    Or look for negative cofitness