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  • Top cofit genes for GFF3518 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1683 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.67
    2 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.60
    3 GFF6300 CaiB/BaiF family protein no 0.60
    4 GFF1755 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.59
    5 GFF4164 Thymidine phosphorylase (EC 2.4.2.4) no 0.59
    6 GFF3525 Protein tyrosine/serine phosphatase no 0.59
    7 GFF1427 Mandelate racemase (EC 5.1.2.2) no 0.58
    8 GFF498 Squalene/phytoene desaturase HopC no 0.58
    9 GFF1369 Serine--glyoxylate aminotransferase (EC 2.6.1.45) no 0.57
    10 GFF1961 Prephenate dehydratase (EC 4.2.1.51) @ Arogenate dehydratase (EC 4.2.1.91) no 0.57
    11 GFF1880 Previously called glutamate synthase [NADPH] small chain no 0.57
    12 GFF2554 Integral membrane protein no 0.56
    13 GFF3166 Transcriptional regulator, IclR family no 0.56
    14 GFF6764 Transcriptional regulator, MarR family no 0.54
    15 GFF2087 Ser/Thr and Tyr protein phosphatase (dual specificity) no 0.54
    16 GFF1385 Multidrug resistance transporter, Bcr/CflA family no 0.53
    17 GFF4445 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) no 0.53
    18 GFF1795 Hydantoin racemase (EC 5.1.99.5) no 0.53
    19 GFF4980 Transcriptional regulator, AsnC family no 0.53
    20 GFF5524 Predicted transcriptional regulator no 0.52

    Or look for negative cofitness