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  • Top cofit genes for PS417_17980 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: YbbM seven transmembrane helix protein
    KEGG: putative ABC transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06440 iron ABC transporter 0.40 0.20
    2 PS417_18255 AMP-binding protein no 0.20
    3 PS417_08045 uracil permease no 0.20
    4 PS417_08155 integration host factor subunit beta no 0.19
    5 PS417_16465 sirohydrochlorin ferrochelatase no 0.19
    6 PS417_03490 type III secretion system protein SsaR no 0.19
    7 PS417_08070 nickel ABC transporter permease no 0.19
    8 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF no 0.18
    9 PS417_10260 peptidase no 0.18
    10 PS417_18530 O-succinylhomoserine sulfhydrylase no 0.18
    11 PS417_20160 cysteine synthase no 0.17
    12 PS417_18560 N-(5'-phosphoribosyl)anthranilate isomerase 0.25 0.17
    13 PS417_21340 short-chain dehydrogenase 0.46 0.17
    14 PS417_26040 malate synthase no 0.17
    15 PS417_17485 membrane protein no 0.17
    16 PS417_06905 alcohol dehydrogenase 0.36 0.17
    17 PS417_14970 MFS transporter no 0.17
    18 PS417_04180 GntR family transcriptional regulator 0.46 0.17
    19 PS417_21750 acetyl-CoA synthetase 0.58 0.17
    20 PS417_17490 ABC transporter ATP-binding protein no 0.17

    Or look for negative cofitness