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  • Top cofit genes for PS417_17965 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01260 hypothetical protein no 0.26
    2 PS417_15085 ATPase AAA 0.68 0.22
    3 PS417_15105 membrane protein no 0.21
    4 PS417_15110 protein BatD 0.67 0.20
    5 PS417_12275 2,4-dienoyl-CoA reductase 0.24 0.20
    6 PS417_19935 hypothetical protein 0.44 0.19
    7 PS417_16255 RNA polymerase sigma factor no 0.19
    8 PS417_13040 TetR family transcriptional regulator 0.26 0.19
    9 PS417_10580 glutamine synthetase no 0.18
    10 PS417_08775 thiosulfate transporter subunit no 0.18
    11 PS417_02115 acyltransferase no 0.18
    12 PS417_06245 zinc metallopeptidase RseP no 0.17
    13 PS417_03485 type III secretion protein no 0.17
    14 PS417_14485 malto-oligosyltrehalose trehalohydrolase 0.24 0.17
    15 PS417_23290 hypothetical protein no 0.17
    16 PS417_12520 hypothetical protein 0.33 0.17
    17 PS417_22045 peptide deformylase 0.32 0.17
    18 PS417_21220 acetyl-CoA acetyltransferase 0.56 0.17
    19 PS417_19560 amino acid ABC transporter substrate-binding protein 0.33 0.17
    20 PS417_01600 peptidase M23 no 0.17

    Or look for negative cofitness