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Cofit
Protein
Homologs
Top cofit genes for PS417_17940 from
Pseudomonas simiae WCS417
sorbosone dehydrogenase
SEED: L-sorbosone dehydrogenase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_00620
GntR family transcriptional regulator
no
0.22
2
PS417
_26080
TonB-dependent receptor
0.17
0.21
3
PS417
_17690
amidase
no
0.21
4
PS417
_15335
hypothetical protein
no
0.21
5
PS417
_10575
DNA alkylation repair protein
no
0.19
6
PS417
_10455
membrane protein
0.55
0.19
7
PS417
_18870
hypothetical protein
no
0.19
8
PS417
_12610
RNA polymerase sigma factor
no
0.19
9
PS417
_17045
hypothetical protein
no
0.18
10
PS417
_21425
4-amino-4-deoxychorismate lyase
no
0.18
11
PS417
_11625
fumarate hydratase
no
0.18
12
PS417
_11170
aldehyde dehydrogenase
no
0.18
13
PS417
_24450
membrane protein
no
0.18
14
PS417
_03010
XRE family transcriptional regulator
no
0.18
15
PS417
_15865
hypothetical protein
no
0.18
16
PS417
_21470
peptidase S49
no
0.18
17
PS417
_05035
hypothetical protein
no
0.18
18
PS417
_07020
chemotaxis protein
no
0.17
19
PS417
_02520
chemotaxis protein
no
0.17
20
PS417
_00490
iron ABC transporter ATP-binding protein
0.22
0.17
Or look for
negative cofitness