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  • Top cofit genes for PS417_17935 from Pseudomonas simiae WCS417

    endoribonuclease L-PSP
    SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19650 chemotaxis protein CheW no 0.31
    2 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase no 0.30
    3 PS417_19655 chemotaxis protein CheW no 0.30
    4 PS417_21575 chemotaxis protein no 0.29
    5 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.29
    6 PS417_19690 histidine kinase no 0.29
    7 PS417_19675 chemotaxis protein CheY no 0.28
    8 PS417_19665 flagellar motor protein MotD no 0.28
    9 PS417_22565 formyltetrahydrofolate deformylase no 0.28
    10 PS417_21595 flagellar biosynthesis protein FlgN no 0.28
    11 PS417_03560 GTP-binding protein no 0.27
    12 PS417_21390 hypothetical protein no 0.27
    13 PS417_19870 flagellar rod assembly protein FlgJ no 0.27
    14 PS417_03165 hypothetical protein no 0.27
    15 PS417_19865 flagellar hook protein FlgK no 0.27
    16 PS417_19860 flagellar hook protein FlgL no 0.27
    17 PS417_19660 cobalamin biosynthesis protein CobQ no 0.27
    18 PS417_19725 flagellar biosynthesis protein FlhB no 0.27
    19 PS417_27865 LysR family transcriptional regulator no 0.27
    20 PS417_19755 flagellar motor switch protein FliM no 0.27

    Or look for negative cofitness