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  • Top cofit genes for GFF3502 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7356 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.65
    2 GFF689 protein of unknown function DUF521 no 0.60
    3 GFF6952 Metallo-beta-lactamase family protein, RNA-specific no 0.54
    4 GFF3718 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB (EC 3.5.1.110) no 0.54
    5 GFF4506 hypothetical protein no 0.54
    6 GFF61 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) no 0.52
    7 GFF4106 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.51
    8 GFF3374 no description no 0.51
    9 GFF1561 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.51
    10 GFF1669 hypothetical protein no 0.50
    11 GFF5743 Flagellar motor switch protein FliM no 0.50
    12 GFF912 putative acetyl esterase no 0.49
    13 GFF4144 Prolyl endopeptidase (EC 3.4.21.26) no 0.49
    14 GFF6110 N-acyl-D-amino-acid deacylase (EC 3.5.1.81) no 0.49
    15 GFF7309 Transcriptional regulator, LysR family no 0.49
    16 GFF2665 FIG001454: Transglutaminase-like enzymes, putative cysteine proteases no 0.49
    17 GFF3226 no description no 0.49
    18 GFF92 KEGG: general secretion pathway protein I no 0.48
    19 GFF744 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases no 0.48
    20 GFF3544 no description no 0.48

    Or look for negative cofitness