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Cofit
Protein
Homologs
Top cofit genes for GFF35 from
Variovorax sp. SCN45
FOG: Ankyrin repeat
SEED: FOG: Ankyrin repeat
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7313
hypothetical protein
no
0.58
2
GFF1089
Polyphosphate kinase (EC 2.7.4.1)
0.37
0.57
3
GFF1073
Glutathione S-transferase (EC 2.5.1.18)
no
0.55
4
GFF5710
no description
no
0.54
5
GFF4664
hypothetical protein
no
0.52
6
GFF4185
RNA polymerase ECF-type sigma factor
no
0.52
7
GFF711
KEGG: ribose transport system permease protein
no
0.52
8
GFF7373
CaiB/BaiF family protein
no
0.51
9
GFF5394
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.51
10
GFF5185
FIG00732904: hypothetical protein
no
0.50
11
GFF5189
L-arabinolactonase (EC 3.1.1.15)
no
0.49
12
GFF7295
HPr kinase/phosphorylase
no
0.49
13
GFF5325
3-dehydroquinate synthase (EC 4.2.3.4)
no
0.49
14
GFF1055
Fumarylacetoacetate hydrolase family protein
no
0.48
15
GFF4430
hypothetical protein
no
0.46
16
GFF3149
RND efflux system, inner membrane transporter
no
0.46
17
GFF4386
FIG00457034: hypothetical protein
no
0.46
18
GFF36
Similar to Agmatine deiminase
no
0.46
19
GFF2210
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
no
0.46
20
GFF2672
ABC transporter, ATP-binding protein
no
0.46
Or look for
negative cofitness