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  • Top cofit genes for GFF35 from Variovorax sp. SCN45

    FOG: Ankyrin repeat
    SEED: FOG: Ankyrin repeat

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7313 hypothetical protein no 0.58
    2 GFF1089 Polyphosphate kinase (EC 2.7.4.1) 0.37 0.57
    3 GFF1073 Glutathione S-transferase (EC 2.5.1.18) no 0.55
    4 GFF5710 no description no 0.54
    5 GFF4664 hypothetical protein no 0.52
    6 GFF4185 RNA polymerase ECF-type sigma factor no 0.52
    7 GFF711 KEGG: ribose transport system permease protein no 0.52
    8 GFF7373 CaiB/BaiF family protein no 0.51
    9 GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.51
    10 GFF5185 FIG00732904: hypothetical protein no 0.50
    11 GFF5189 L-arabinolactonase (EC 3.1.1.15) no 0.49
    12 GFF7295 HPr kinase/phosphorylase no 0.49
    13 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.49
    14 GFF1055 Fumarylacetoacetate hydrolase family protein no 0.48
    15 GFF4430 hypothetical protein no 0.46
    16 GFF3149 RND efflux system, inner membrane transporter no 0.46
    17 GFF4386 FIG00457034: hypothetical protein no 0.46
    18 GFF36 Similar to Agmatine deiminase no 0.46
    19 GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly no 0.46
    20 GFF2672 ABC transporter, ATP-binding protein no 0.46

    Or look for negative cofitness