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  • Top cofit genes for PS417_17865 from Pseudomonas simiae WCS417

    2-keto-3-deoxy-L-rhamnonate aldolase
    SEED: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.n4)
    KEGG: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00905 histidine kinase no 0.21
    2 PS417_05570 DeoR faimly transcriptional regulator no 0.18
    3 PS417_06875 iron dicitrate transport regulator FecR no 0.18
    4 PS417_04985 ketosteroid isomerase 0.16 0.17
    5 PS417_20860 DNA polymerase III subunit gamma/tau 0.45 0.17
    6 PS417_27325 multidrug ABC transporter ATP-binding protein no 0.16
    7 PS417_20050 cobalamin biosynthesis protein CobD no 0.16
    8 PS417_11630 sodium:dicarboxylate symporter no 0.16
    9 PS417_15635 hypothetical protein no 0.16
    10 PS417_03325 acid phosphatase no 0.16
    11 PS417_26765 membrane protein 0.51 0.15
    12 PS417_02375 hypothetical protein no 0.15
    13 PS417_05000 TonB-dependent receptor no 0.15
    14 PS417_25040 hypothetical protein no 0.15
    15 PS417_04015 choline ABC transporter permease no 0.15
    16 PS417_17845 3,4-dihydroxyphenylacetate 2,3-dioxygenase 0.31 0.15
    17 PS417_21070 aconitate hydratase no 0.15
    18 PS417_06730 3-carboxy-cis,cis-muconate cycloisomerase no 0.14
    19 PS417_04010 glycine/betaine ABC transporter ATP-binding protein no 0.14
    20 PS417_01890 TetR family transcriptional regulator no 0.14

    Or look for negative cofitness