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  • Top cofit genes for GFF3489 from Sphingobium sp. HT1-2

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1484 Free methionine-(R)-sulfoxide reductase, contains GAF domain 0.17 0.73
    2 GFF4538 hypothetical protein no 0.68
    3 GFF2155 hypothetical protein no 0.67
    4 GFF1163 hypothetical protein no 0.67
    5 GFF3728 Flagellar M-ring protein FliF 0.11 0.65
    6 GFF1246 FIG00854991: hypothetical protein no 0.63
    7 GFF3509 type II secretion system protein N no 0.63
    8 GFF634 hypothetical protein no 0.62
    9 GFF2873 2-pyrone-4,6-dicarboxylic acid hydrolase (EC 3.1.1.57) no 0.61
    10 GFF2200 Lysozyme (N-acetylmuramidase) family, (EC 3.2.1.17) no 0.60
    11 GFF3815 Uncharacterized MFS-type transporter no 0.60
    12 GFF1123 putative capsular polysaccharide biosynthesis protein no 0.60
    13 GFF2330 hypothetical protein no 0.60
    14 GFF108 S-adenosylmethionine:diacylgycerolhomoserine-N- methyltransferase, BtaB protein no 0.60
    15 GFF2339 hypothetical protein no 0.60
    16 GFF1412 hypothetical protein no 0.60
    17 GFF508 Nucleoside permease NupC 0.29 0.59
    18 GFF1658 Malate synthase G (EC 2.3.3.9) no 0.59
    19 GFF5130 conserved hypothetical protein-transmembrane prediction no 0.59
    20 GFF823 Adenosylcobinamide kinase (EC 2.7.1.156) / Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 0.29 0.58

    Or look for negative cofitness