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  • Top cofit genes for PS417_17840 from Pseudomonas simiae WCS417

    betaine-aldehyde dehydrogenase
    SEED: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60)
    KEGG: 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27915 type VI secretion system protein ImpM no 0.24
    2 PS417_17085 fimbrial assembly protein no 0.22
    3 PS417_22530 hypothetical protein no 0.21
    4 PS417_09620 lipopolysaccharide biosynthesis protein no 0.21
    5 PS417_16910 multidrug resistance protein B 0.47 0.21
    6 PS417_14040 alkyl hydroperoxide reductase 0.83 0.20
    7 PS417_19735 flagellar biosynthesis protein FliQ no 0.20
    8 PS417_24600 hydrogenase no 0.20
    9 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 0.59 0.20
    10 PS417_09595 membrane protein no 0.20
    11 PS417_22725 chemotaxis protein no 0.20
    12 PS417_02355 thiamine biosynthesis protein ThiC 0.59 0.19
    13 PS417_08345 chemotaxis protein no 0.19
    14 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA no 0.19
    15 PS417_19785 flagellar biogenesis protein no 0.19
    16 PS417_26815 peptidase M16 0.25 0.19
    17 PS417_01955 peptidase 0.40 0.19
    18 PS417_19745 flagellar assembly protein FliO no 0.19
    19 PS417_01990 cell division protein no 0.19
    20 PS417_10865 GNAT family acetyltransferase no 0.19

    Or look for negative cofitness