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  • Top cofit genes for GFF3484 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: ABC transporter substrate-binding protein
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF506 hypothetical protein no 0.44
    2 GFF7031 hypothetical protein no 0.42
    3 GFF164 DinG family ATP-dependent helicase CPE1197 no 0.42
    4 GFF2394 MotA/TolQ/ExbB proton channel family protein no 0.42
    5 GFF1273 no description no 0.42
    6 GFF3972 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.42
    7 GFF3538 Ferric iron ABC transporter, iron-binding protein no 0.41
    8 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.41
    9 GFF2712 no description no 0.41
    10 GFF2976 hypothetical protein no 0.40
    11 GFF3392 Transcriptional regulator, AraC family no 0.40
    12 GFF1801 Transcriptional regulator, LysR family no 0.40
    13 GFF544 Isoleucyl-tRNA synthetase (EC 6.1.1.5) no 0.40
    14 GFF862 hypothetical protein no 0.39
    15 GFF849 putative carboxylesterase no 0.39
    16 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) no 0.39
    17 GFF842 hypothetical protein no 0.38
    18 GFF6349 no description no 0.38
    19 GFF691 hypothetical protein no 0.38
    20 GFF652 bacteriophytochrome heme oxygenase BphO no 0.38

    Or look for negative cofitness