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  • Top cofit genes for PS417_17835 from Pseudomonas simiae WCS417

    2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
    SEED: 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
    KEGG: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_28170 transcriptional regulator no 0.23
    2 PS417_00625 taurine dioxygenase 0.34 0.22
    3 PS417_13295 TetR family transcriptional regulator no 0.22
    4 PS417_17305 hypothetical protein no 0.22
    5 PS417_09465 FMN reductase 0.14 0.21
    6 PS417_03140 3-ketoacyl-ACP reductase no 0.21
    7 PS417_02895 precorrin-6Y C5,15-methyltransferase no 0.21
    8 PS417_15770 pyridoxine 5'-phosphate oxidase 0.62 0.21
    9 PS417_20570 3-oxoacyl-ACP synthase no 0.21
    10 PS417_17905 hypothetical protein no 0.20
    11 PS417_04960 hypothetical protein no 0.20
    12 PS417_11245 RNA polymerase subunit sigma-24 no 0.20
    13 PS417_16500 arginyl-tRNA-protein transferase no 0.20
    14 PS417_15285 type VI secretion protein no 0.20
    15 PS417_07895 hypothetical protein no 0.20
    16 PS417_19535 dihydroneopterin aldolase 0.25 0.20
    17 PS417_00845 transcriptional regulator no 0.20
    18 PS417_12380 peptidase S54 no 0.20
    19 PS417_25840 SpoVR family protein no 0.20
    20 PS417_13555 ABC transporter permease no 0.19

    Or look for negative cofitness