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  • Top cofit genes for PS417_17830 from Pseudomonas simiae WCS417

    4-hydroxyphenylacetate isomerase
    SEED: 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
    KEGG: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_15165 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase no 0.23
    2 PS417_27085 AraC family transcriptional regulator 0.30 0.21
    3 PS417_06885 dihydrodipicolinate synthase no 0.20
    4 PS417_12820 hypothetical protein no 0.20
    5 PS417_27455 isoprenoid biosynthesis protein no 0.20
    6 PS417_09030 alpha/beta hydrolase 0.57 0.19
    7 PS417_07010 pseudouridine synthase no 0.19
    8 PS417_20025 alpha-ribazole phosphatase no 0.19
    9 PS417_18995 endonuclease no 0.19
    10 PS417_27100 phosphohydrolase no 0.18
    11 PS417_10315 cytochrome C biogenesis protein no 0.18
    12 PS417_15410 hypothetical protein no 0.17
    13 PS417_23435 serine/threonine protein kinase no 0.17
    14 PS417_17935 endoribonuclease L-PSP no 0.17
    15 PS417_22840 tRNA-Met no 0.17
    16 PS417_06540 membrane protein 0.30 0.17
    17 PS417_04035 hypothetical protein no 0.16
    18 PS417_25315 membrane protein no 0.16
    19 PS417_27635 magnesium chelatase no 0.16
    20 PS417_10005 Pyocin large subunit-like protein no 0.16

    Or look for negative cofitness