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  • Top cofit genes for PS417_17825 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator
    SEED: Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family
    KEGG: AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_07095 histidine kinase no 0.26
    2 PS417_19625 histidine kinase no 0.25
    3 PS417_19615 chemotaxis protein CheW no 0.25
    4 PS417_09085 hypothetical protein 0.41 0.24
    5 PS417_18705 succinate dehydrogenase 0.16 0.24
    6 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.24
    7 PS417_19630 LuxR family transcriptional regulator no 0.23
    8 PS417_19265 membrane protein no 0.23
    9 PS417_19645 chemotaxis protein no 0.22
    10 PS417_06625 hypothetical protein no 0.22
    11 PS417_03930 thymidine phosphorylase no 0.21
    12 PS417_19685 protein phosphatase no 0.21
    13 PS417_19620 hypothetical protein no 0.21
    14 PS417_04855 polysaccharide deacetylase no 0.21
    15 PS417_19635 lipid kinase no 0.21
    16 PS417_13730 hypothetical protein no 0.21
    17 PS417_19805 flagellar M-ring protein FliF 0.41 0.20
    18 PS417_02765 phosphate starvation-inducible protein PsiF no 0.20
    19 PS417_24710 lipoprotein no 0.20
    20 PS417_26225 electron transfer flavoprotein subunit beta no 0.20

    Or look for negative cofitness