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  • Top cofit genes for GFF3478 from Variovorax sp. SCN45

    Cytochrome c peroxidase (EC 1.11.1.5)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5915 T6SS secretion lipoprotein TssJ (VasD) no 0.48
    2 GFF2606 Tripartite tricarboxylate transporter TctC family no 0.48
    3 GFF1754 Nicel/Cobalt-specific TonB-dependent outer membrane receptor no 0.47
    4 GFF4564 hypothetical protein no 0.46
    5 GFF6969 hypothetical protein no 0.46
    6 GFF3440 FIG00460300: hypothetical protein no 0.46
    7 GFF1579 hypothetical protein no 0.45
    8 GFF3027 T6SS component TssK (ImpJ/VasE) no 0.44
    9 GFF973 PQQ-dependent oxidoreductase, gdhB family no 0.44
    10 GFF4071 Butyryl-CoA dehydrogenase (EC 1.3.99.2) no 0.44
    11 GFF5100 putative membrane protein no 0.43
    12 GFF7154 Toxin HigB / Protein kinase domain of HipA no 0.43
    13 GFF7327 FIG074102: hypothetical protein no 0.42
    14 GFF1028 FIG027190: Putative transmembrane protein no 0.42
    15 GFF1804 Uncharacterized UPF0118 membrane protein 0.43 0.42
    16 GFF7354 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) no 0.41
    17 GFF4936 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.41
    18 GFF5298 FIG01204242: hypothetical protein no 0.41
    19 GFF3138 VgrG protein no 0.41
    20 GFF3240 hypothetical protein no 0.41

    Or look for negative cofitness