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Cofit
Protein
Homologs
Top cofit genes for GFF3478 from
Variovorax sp. SCN45
Cytochrome c peroxidase (EC 1.11.1.5)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5915
T6SS secretion lipoprotein TssJ (VasD)
no
0.48
2
GFF2606
Tripartite tricarboxylate transporter TctC family
no
0.48
3
GFF1754
Nicel/Cobalt-specific TonB-dependent outer membrane receptor
no
0.47
4
GFF4564
hypothetical protein
no
0.46
5
GFF6969
hypothetical protein
no
0.46
6
GFF3440
FIG00460300: hypothetical protein
no
0.46
7
GFF1579
hypothetical protein
no
0.45
8
GFF3027
T6SS component TssK (ImpJ/VasE)
no
0.44
9
GFF973
PQQ-dependent oxidoreductase, gdhB family
no
0.44
10
GFF4071
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
no
0.44
11
GFF5100
putative membrane protein
no
0.43
12
GFF7154
Toxin HigB / Protein kinase domain of HipA
no
0.43
13
GFF7327
FIG074102: hypothetical protein
no
0.42
14
GFF1028
FIG027190: Putative transmembrane protein
no
0.42
15
GFF1804
Uncharacterized UPF0118 membrane protein
0.43
0.42
16
GFF7354
1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149)
no
0.41
17
GFF4936
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.41
18
GFF5298
FIG01204242: hypothetical protein
no
0.41
19
GFF3138
VgrG protein
no
0.41
20
GFF3240
hypothetical protein
no
0.41
Or look for
negative cofitness