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Cofit
Protein
Homologs
Top cofit genes for GFF3477 from
Variovorax sp. SCN45
Phosphoprotein phosphatase
SEED: Phosphoprotein phosphatase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3301
Lignostilbene-alpha,beta-dioxygenase and related enzymes
no
0.59
2
GFF1042
Glutathione S-transferase, unnamed subgroup 2 (EC 2.5.1.18)
no
0.57
3
GFF7010
no description
no
0.57
4
GFF423
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
no
0.54
5
GFF587
Multimeric flavodoxin WrbA
no
0.53
6
GFF2551
Endonuclease/exonuclease/phosphatase
no
0.52
7
GFF2904
hypothetical protein
no
0.52
8
GFF7145
Transcriptional regulator, GntR family
no
0.52
9
GFF5218
ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.51
10
GFF3206
no description
no
0.50
11
GFF5269
4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)
no
0.50
12
GFF6263
Uncharacterized protein Atu0170, clustered with phosphonate utilization
no
0.49
13
GFF1873
KEGG: LacI family transcriptional regulator
no
0.49
14
GFF567
KEGG: type IV fimbrial biogenesis protein FimT
no
0.49
15
GFF6383
FIG00440100: hypothetical protein
no
0.49
16
GFF6244
Predicted deacylase
no
0.48
17
GFF1871
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1)
no
0.48
18
GFF4063
Cytochrome c family protein
no
0.48
19
GFF5742
Flagellar motor switch protein FliN
no
0.48
20
GFF347
Exported protein
no
0.48
Or look for
negative cofitness