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  • Top cofit genes for GFF3477 from Sphingobium sp. HT1-2

    UPF0758 family protein
    SEED: DNA repair protein RadC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3420 Acetyltransferase no 0.92
    2 GFF3519 General secretion pathway protein D no 0.81
    3 GFF60 Pyruvate,phosphate dikinase (EC 2.7.9.1) no 0.79
    4 GFF5056 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) no 0.79
    5 GFF1921 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) no 0.78
    6 GFF362 Sensory box/GGDEF family protein no 0.77
    7 GFF1920 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) no 0.76
    8 GFF754 Carboxyl-terminal protease (EC 3.4.21.102) no 0.76
    9 GFF2463 Membrane protein no 0.75
    10 GFF4057 Monofunctional biosynthetic peptidoglycan transglycosylase no 0.75
    11 GFF4093 SSU rRNA ## 16S rRNA, small subunit ribosomal RNA no 0.74
    12 GFF1464 TonB-dependent receptor no 0.74
    13 GFF3027 HoxN/HupN/NixA family nickel/cobalt transporter no 0.73
    14 GFF3631 ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.73
    15 GFF3099 hypothetical protein no 0.73
    16 GFF2710 Type II restriction enzyme PaeR7I (EC 3.1.21.4) no 0.72
    17 GFF4688 L-alanine-DL-glutamate epimerase (EC 5.1.1.n1) no 0.72
    18 GFF5045 hypothetical protein no 0.72
    19 GFF4151 Thiazole tautomerase TenI (EC 5.3.99.10) no 0.72
    20 GFF5345 Type I restriction-modification system, specificity subunit S no 0.71

    Or look for negative cofitness