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  • Top cofit genes for PS417_17795 from Pseudomonas simiae WCS417

    ABC transporter permease

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_23730 LysR family transcriptional regulator no 0.25
    2 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) no 0.24
    3 PS417_05075 serine dehydratase no 0.23
    4 PS417_12665 hypothetical protein no 0.23
    5 PS417_01570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.45 0.21
    6 PS417_23725 methylmalonate-semialdehyde dehydrogenase 0.66 0.21
    7 PS417_27300 cell division protein ZapA no 0.21
    8 PS417_01995 hypothetical protein no 0.21
    9 PS417_26220 Rieske (2Fe-2S) protein no 0.20
    10 PS417_27690 XRE family transcriptional regulator no 0.20
    11 PS417_19620 hypothetical protein no 0.20
    12 PS417_21965 GNAT family acetyltransferase no 0.20
    13 PS417_18920 hypothetical protein no 0.19
    14 PS417_05840 LuxR family transcriptional regulator no 0.18
    15 PS417_23690 Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) (from data) no 0.18
    16 PS417_05080 LysR family transcriptional regulator no 0.18
    17 PS417_20580 isocitrate dehydrogenase no 0.18
    18 PS417_00295 hypothetical protein no 0.18
    19 PS417_25705 lipoate--protein ligase no 0.18
    20 PS417_14980 universal stress protein UspA no 0.18

    Or look for negative cofitness