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  • Top cofit genes for GFF3475 from Variovorax sp. SCN45

    Gate supefamily SpmA/SpmB domains protein
    SEED: Fused spore maturation proteins A and B

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.57
    2 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.56
    3 GFF915 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.54
    4 GFF6086 Putative short-chain dehydrogenase no 0.54
    5 GFF5840 hypothetical protein no 0.53
    6 GFF6683 Efflux ABC transporter, permease protein no 0.53
    7 GFF6635 FIG00441227: hypothetical protein no 0.52
    8 GFF5248 Outer membrane porin protein 32 precursor no 0.52
    9 GFF4676 hypothetical protein no 0.52
    10 GFF7410 no description no 0.52
    11 GFF7022 Amidohydrolase domain protein no 0.51
    12 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.51
    13 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) no 0.51
    14 GFF5668 Uncharacterized MFS-type transporter no 0.50
    15 GFF6957 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) 0.47 0.50
    16 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.50
    17 GFF6745 hypothetical protein no 0.49
    18 GFF5684 3-ketoacyl-CoA thiolase (EC 2.3.1.16) no 0.49
    19 GFF1315 Cyclic di-GMP-binding protein BcsB 0.32 0.49
    20 GFF6157 Carbon monoxide oxidation accessory protein CoxD no 0.49

    Or look for negative cofitness