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  • Top cofit genes for GFF3472 from Variovorax sp. SCN45

    Nitrilotriacetate monooxygenase component B (EC 1.14.13.-)
    SEED: Nitrilotriacetate monooxygenase component B (EC 1.14.13.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF275 FIG00349534: hypothetical protein no 0.69
    2 GFF5669 hypothetical protein no 0.62
    3 GFF3360 no description no 0.61
    4 GFF5340 Efflux ABC transporter, ATP-binding protein 0.21 0.60
    5 GFF6773 Transcriptional regulator, GntR family no 0.58
    6 GFF7411 no description no 0.58
    7 GFF7319 hypothetical protein no 0.56
    8 GFF1302 DoxX family protein no 0.55
    9 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.53 0.55
    10 GFF1556 Tricarboxylate transport protein TctC no 0.55
    11 GFF5795 esterase, PHB depolymerase family no 0.54
    12 GFF4223 BUG/TctC family periplasmic protein no 0.54
    13 GFF2164 Transcriptional regulator, IclR family no 0.53
    14 GFF2539 FAD/FMN-containing dehydrogenases no 0.53
    15 GFF769 Conserved TM helix no 0.53
    16 GFF871 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.53
    17 GFF4482 Transcriptional regulator MraZ no 0.52
    18 GFF2022 Acyl-CoA dehydrogenase no 0.52
    19 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) no 0.52
    20 GFF7271 Transcriptional regulator, LacI family no 0.51

    Or look for negative cofitness