Top cofit genes for GFF3471 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Putative two-component response regulator and GGDEF family protein YeaJ
SEED: Putative two-component response regulator and GGDEF family protein YeaJ

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF3862		Deoxycytidine triphosphate deaminase (EC 3.5.4.13)	no	0.69
2	GFF4162		DNA repair protein RecN	no	0.67
3	GFF1081		UPF0246 protein YaaA	no	0.65
4	GFF2743		Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	no	0.65
5	GFF2505		Multiple antibiotic resistance protein MarB	no	0.64
6	GFF1032		DNA polymerase III psi subunit (EC 2.7.7.7)	no	0.64
7	GFF1366		putative cytoplasmic protein	no	0.63
8	GFF2216		DNA polymerase I (EC 2.7.7.7)	no	0.61
9	GFF1905		FIG00732228: membrane protein	no	0.61
10	GFF330		Transposase	no	0.61
11	GFF296		Multidrug resistance protein D	0.69	0.60
12	GFF684		Putative membrane protein	no	0.59
13	GFF4634		Citrate synthase (si) (EC 2.3.3.1)	0.63	0.59
14	GFF241		ATP-dependent DNA helicase UvrD/PcrA	no	0.58
15	GFF749		Putative transport protein/putative regulator	no	0.58
16	GFF663		Imidazolonepropionase (EC 3.5.2.7)	no	0.58
17	GFF2541		putative cytoplasmic protein	no	0.57
18	GFF1564		Carbon starvation induced protein CsiD	no	0.57
19	GFF3423		FIG00643583: hypothetical protein	no	0.56
20	GFF633		Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	no	0.56

Or look for negative cofitness