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Cofit
Protein
Homologs
Top cofit genes for GFF3466 from
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Transcriptional regulator, AraC family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4908
FIG003145: Surface protein
no
0.57
2
GFF4468
Putative periplasmic protein
no
0.54
3
GFF286
Mediator of hyperadherence YidE
no
0.53
4
GFF1327
2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
no
0.52
5
GFF3938
Ethanolamine utilization protein similar to PduL
0.29
0.52
6
GFF2021
FIG01049650: hypothetical protein
no
0.52
7
GFF2493
FIG01047459: hypothetical protein
no
0.51
8
GFF2413
FIG021952: putative membrane protein
no
0.50
9
GFF201
Ferredoxin-like protein FixX
no
0.47
10
GFF4591
Hypothetical lipoprotein ybfN precursor
0.27
0.46
11
GFF1291
Phage minor tail protein #Phage minor tail protein T
no
0.46
12
GFF2799
Inner membrane protein
no
0.46
13
GFF4416
Methionine ABC transporter substrate-binding protein
no
0.45
14
GFF1985
tRNA-Ala-GGC
no
0.45
15
GFF713
FIG01047037: hypothetical protein
no
0.45
16
GFF3925
Putative inner membrane protein
no
0.45
17
GFF2795
NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
no
0.44
18
GFF1623
Exodeoxyribonuclease X (EC 3.1.11.-)
no
0.44
19
GFF2790
Hydrogenase maturation protease (EC 3.4.24.-)
no
0.44
20
GFF4419
Selenophosphate-dependent tRNA 2-selenouridine synthase
0.40
0.43
Or look for
negative cofitness